Index reorganization
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3e6c535f42
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@ -33,6 +33,7 @@
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#define ZRCOLA_NOVTABLE __declspec(novtable)
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#pragma warning(push)
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#pragma warning(disable: 4251)
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#pragma warning(disable: 4512)
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///
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@ -54,16 +55,26 @@ namespace ZRCola {
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///
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/// Memory index
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///
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template <class T = unsigned __int32>
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class index : public std::vector<T>
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template <class T, class T_idx = unsigned __int32>
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class index : public std::vector<T_idx>
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{
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protected:
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std::vector<T> &host; ///< Reference to host data
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public:
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///
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/// Constructs the index
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///
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/// \param[in] h Reference to vector holding the data
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///
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index(_In_ std::vector<T> &h) : host(h) {}
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///
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/// Sorts index
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///
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inline void sort()
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{
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qsort_s(data(), size(), sizeof(T), compare_s, this);
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qsort_s(data(), size(), sizeof(T_idx), compare_s, this);
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}
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///
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@ -77,12 +88,13 @@ namespace ZRCola {
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/// - =0 when a == b
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/// - >0 when a > b
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///
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virtual int compare(_In_ const void *a, _In_ const void *b) const = 0;
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virtual int compare(_In_ const T &a, _In_ const T &b) const = 0;
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private:
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static int __cdecl compare_s(void *p, const void *a, const void *b)
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{
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return ((const index<T>*)p)->compare(a, b);
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const index<T, T_idx> *t = (const index<T, T_idx>*)p;
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return t->compare(t->host[*(const T_idx*)a], t->host[*(const T_idx*)b]);
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}
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};
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@ -81,18 +81,15 @@ namespace ZRCola {
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///
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/// Composition index
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///
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class indexComp : public index<unsigned __int32>
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class indexComp : public index<unsigned __int16, unsigned __int32>
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{
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protected:
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std::vector<unsigned __int16> &source; ///< Reference to source data
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public:
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///
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/// Constructs the index
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///
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/// \param[in] d Reference to vector holding the data
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/// \param[in] h Reference to vector holding the data
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///
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indexComp(_In_ std::vector<unsigned __int16> &s) : source(s) {}
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indexComp(_In_ std::vector<unsigned __int16> &h) : index<unsigned __int16, unsigned __int32>(h) {}
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///
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/// Compares two transformations by string
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@ -105,11 +102,11 @@ namespace ZRCola {
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/// - =0 when a == b
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/// - >0 when a > b
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///
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virtual int compare(_In_ const void *a, _In_ const void *b) const
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virtual int compare(_In_ const unsigned __int16 &a, _In_ const unsigned __int16 &b) const
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{
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const translation
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&trans_a = (const translation&)source[*(const unsigned __int32*)a],
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&trans_b = (const translation&)source[*(const unsigned __int32*)b];
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&trans_a = (const translation&)a,
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&trans_b = (const translation&)b;
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int r = translation::CompareString(trans_a.str, trans_a.str_len, trans_b.str, trans_b.str_len);
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if (r != 0) return r;
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@ -125,18 +122,15 @@ namespace ZRCola {
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///
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/// Decomposition index
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///
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class indexDecomp : public index<unsigned __int32>
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class indexDecomp : public index<unsigned __int16, unsigned __int32>
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{
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protected:
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std::vector<unsigned __int16> &source; ///< Reference to source data
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public:
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///
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/// Constructs the index
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///
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/// \param[in] d Reference to vector holding the data
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/// \param[in] h Reference to vector holding the data
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///
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indexDecomp(_In_ std::vector<unsigned __int16> &s) : source(s) {}
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indexDecomp(_In_ std::vector<unsigned __int16> &h) : index<unsigned __int16, unsigned __int32>(h) {}
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///
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/// Compares two transformations by string
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@ -149,11 +143,11 @@ namespace ZRCola {
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/// - =0 when a == b
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/// - >0 when a > b
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///
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virtual int compare(_In_ const void *a, _In_ const void *b) const
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virtual int compare(_In_ const unsigned __int16 &a, _In_ const unsigned __int16 &b) const
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{
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const translation
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&trans_a = (const translation&)source[*(const unsigned __int32*)a],
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&trans_b = (const translation&)source[*(const unsigned __int32*)b];
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&trans_a = (const translation&)a,
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&trans_b = (const translation&)b;
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if (trans_a.chr < trans_b.chr) return -1;
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else if (trans_a.chr > trans_b.chr) return +1;
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@ -89,18 +89,15 @@ namespace ZRCola {
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///
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/// Character index
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///
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class indexChr : public index<unsigned __int32>
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class indexChr : public index<unsigned __int16, unsigned __int32>
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{
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protected:
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std::vector<unsigned __int16> &source; ///< Reference to source data
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public:
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///
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/// Constructs the index
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///
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/// \param[in] d Reference to vector holding the data
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/// \param[in] h Reference to vector holding the data
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///
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indexChr(_In_ std::vector<unsigned __int16> &s) : source(s) {}
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indexChr(_In_ std::vector<unsigned __int16> &h) : index<unsigned __int16, unsigned __int32>(h) {}
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///
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/// Compares two key sequences by character
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@ -113,11 +110,11 @@ namespace ZRCola {
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/// - =0 when a == b
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/// - >0 when a > b
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///
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virtual int compare(_In_ const void *a, _In_ const void *b) const
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virtual int compare(_In_ const unsigned __int16 &a, _In_ const unsigned __int16 &b) const
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{
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const keyseq
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&ks_a = (const keyseq&)source[*(const unsigned __int32*)a],
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&ks_b = (const keyseq&)source[*(const unsigned __int32*)b];
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&ks_a = (const keyseq&)a,
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&ks_b = (const keyseq&)b;
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if (ks_a.chr < ks_b.chr) return -1;
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else if (ks_a.chr > ks_b.chr) return +1;
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@ -130,18 +127,15 @@ namespace ZRCola {
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///
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/// Key index
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///
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class indexKey : public index<unsigned __int32>
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class indexKey : public index<unsigned __int16, unsigned __int32>
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{
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protected:
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std::vector<unsigned __int16> &source; ///< Reference to source data
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public:
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///
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/// Constructs the index
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///
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/// \param[in] d Reference to vector holding the data
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/// \param[in] h Reference to vector holding the data
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///
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indexKey(_In_ std::vector<unsigned __int16> &s) : source(s) {}
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indexKey(_In_ std::vector<unsigned __int16> &h) : index<unsigned __int16, unsigned __int32>(h) {}
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///
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/// Compares two key sequences by key
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@ -154,11 +148,11 @@ namespace ZRCola {
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/// - =0 when a == b
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/// - >0 when a > b
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///
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virtual int compare(_In_ const void *a, _In_ const void *b) const
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virtual int compare(_In_ const unsigned __int16 &a, _In_ const unsigned __int16 &b) const
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{
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const keyseq
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&ks_a = (const keyseq&)source[*(const unsigned __int32*)a],
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&ks_b = (const keyseq&)source[*(const unsigned __int32*)b];
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&ks_a = (const keyseq&)a,
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&ks_b = (const keyseq&)b;
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int r = keyseq::CompareSequence(ks_a.seq, ks_a.seq_len, ks_b.seq, ks_b.seq_len);
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if (r != 0) return r;
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